All map layers selected in the Processing Settings menu (that can be seen in the toolbar), including any custom filter map layers, will be shown in the PDF. Any Contours, Features, and Annotations will be overlaid on the maps. To generate the report, right click while active in the Map Window and select View Map Statistics, as shown in Figure 1. The PDF will open automatically in your default PDF reading application (if you have not selected a default application for reading PDFs, you may be prompted to do so).
The following images are from a sample Statistics report of a Stress Analysis flight:
Statistics Report Stress map
Vegetation Fraction map
Yield Potential map
Green NDVI map
Custom Area Density map
High resolution images from the Image Window can also be added to the reports. While active in the Image Window right-click Save current image view--Add to PDF report. Any image layer can be added (use number keys 1-9 to cycle through the layers: NDVIs, Stress, Yield potential, Vegetation fraction, and the four individual bands of the sensor)
High Resolution False-Color view (left) and Stress view (right)
It is called "False-Color" (not true RGB) because the standard SlantRange sensor band configuration inlcudes red and green, but not blue channels. The blue channel is interpolated for this view, which generally is a close match to what the human eye sees.
When generating the PDF report, you will be prompted to add your own logo, as well as any specific notes. These are printed in the page header above the map on the left and right, respectively.